（#共同一作，*通讯作者）
1. 何雨琦，李桂梅，周鑫，李晓璐，高跃东，丁昭莉*， 采用诱导环化酶制备Illumina Mate-paired DNA文库, 基因组学与应用生物学，2019，第38卷，第7 期，第2990-2995页
2. 何雨琦，李桂梅，周鑫，丁昭莉*，2017，用于Illumina 测序平台不同试剂盒制备RNA-seq文库的方法比较，基因组学与应用生物学，第36 卷，第11 期，第4607-4615 页
3. Xunhe Huang#, Guimei Li#, Xing Chen, Yajiang Wu, Weina Li, FushengZhong, Wenzhi Wang, Zhaoli Ding*, Identification of a novel mtDNA lineage B3 in chicken(Gallus gallusdomesticus), Zoological Research, 2017, 38(4): 208-210
4. Xing Chen#, Gang Ni#, Kai He#, Zhao-Li Ding#, Gui-Mei Li, Adeniyi C. Adeola, Robert W. Murphy, Wen-Zhi Wang*, and Ya-Ping Zhang*，Capture Hybridization of Long-Range DNA Fragments for High-Throughput Sequencing, Methods in Molecular Biology，2018，1754:29-44
5. Jiang Liu#, Zhaoli Ding#, Guimei Li#, Li Tang, Yu Xu, HuayouLuo, Jinhua Yi, Youwang Lu, Rui Mao, Qiong Nan, Li Ren, Tong Zhang and Kunhua Wang, Identification and validation of colorectal neoplasia-specific methylation biomarkers based on CTCF-binding sites, Oncotarget, 2017, 8(69): 114183-114194
6. Z-L Ding#, M Oskarsson#, A Ardalan, H Angleby, L-G Dahlgren, C Tepeli, E Kirkness, P Savolainen *and Y-P Zhang*. Origins of domestic dog in Southern East Asia is supported by analysis of Y-chromosome DNA. Heredity ，2012，108:507-514
7. Chunyan Yang#，Kristine Bohmann，Xiaoyang Wang，Wang Cai，Nathan Wales，Zhaoli Ding，Shyam Gopalakrishnan， Douglas W. Yu*，Biodiversity Soup II: A bulk-sample metabarcoding pipeline emphasizing error reduction，Methods in Ecology and Evolution, 2021,00:1-13
8. Hong-Yi Zheng#, Min Xu#, Cui-Xian Yang#, Ren-Rong Tian, Mi Zhang, Jian-Jian Li, Xi-Cheng Wang, Zhao-Li Ding, Gui-Mei Li, Xiao-Lu Li, Yu-Qi He, Xing-Qi Dong*, Yong-Gang Yao* and Yong-Tang Zheng*，Longitudinal transcriptome analyses show robust T cell immunity during recovery from COVID-19，Signal Transduction and Targeted Therapy，2020，Dec 24;5(1):294
9. Nalini Yasoda Hirimuthugoda#, Adeniyi C. Adeola#, Patthamesthrige Wimal Anthony Perera, Xing Chen, Weligalle Wedarallage Dewar Asoka Gunawardena, Humpita Gamaralalage Thilini Nisanka Gunawardana, Tingting Yin, Mingshan Wang, Guimei Li, Zhaoli Ding,Wenzhi Wang, Haibing Xie, Minsheng Peng* and Yaping Zhang*, Sri Lankan pig ancestry revealed by mitochondrial DNA, Y-chromosome, and MC1R, Animal Genetics, 2017, 48, 622–627
10. Shaojun Liu#*, Jing Luo# , Jing Chai# , Li Ren#, Yi Zhou#, Feng Huang# , Xiaochuan Liu#, Yubao Chen , Chun Zhang , Min Tao , Bin Lu, Wei Zhou , Guoliang Lin , Chao Mai, Shuo Yuan, Jun Wang , Tao Li, Qinbo Qin, HaoFeng, KaikunLuo , Jun Xiao, HuanZhong, Rurong Zhao , Wei Duan , Zhenyan Song, Yanqin Wang, Jing Wang, Li Zhong , Lu Wang, Zhaoli Ding, Zhenglin Du, Xuemei Lu, Yun Gao, Robert W. Murphy, Yun Liu , Axel Meyer*, Ya-Ping Zhang*, Genomic incompatibilities in the diploid and tetraploid offspring of the goldfish × common carp cross, PNAS, 2016, 113(5), 1327-1332
11. Zhengkui Zhou#, Yu Jiang#, Zheng Wang#, Zhiheng Gou#, Jun Lyu#, Weiyu Li#, Yanjun Yu, LipingShu, Yingjun Zhao, Yanming Ma , Chao Fang , YantingShen , Tengfei Liu, Congcong Li, Qing Li, Mian Wu , Min Wang , Yunshuai Wu, Yang Dong , Wenting Wan, Xiao Wang, Zhaoli Ding, YuedongGao, Hui Xiang, Baoge Zhu, Suk-Ha Lee, Wen Wang*, Zhixi Tian*, resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean, Nature Biotechnology, 2015, 33, 408-414
12. Liang Yan#, Xiao Wang#, Hui Liu , Yang Tian , JinminLian, Ruijuan Yang , ShumeiHao, Xuanjun Wang , Shengchao Yang, Qiye Li, Shuai Qi , Ling Kui , Moses Okpekum, Xiao Ma, Jiajin Zhang , Zhaoli Ding, Guojie Zhang , Wen Wang, Yang Dong*, Jun Sheng*, The Genome of Dendrobiumofficinale Illuminates the Biology of the Important Traditional Chinese Orchid Herb, Molecular Plant, 2015, 8, 922-934
13. Douglas W. Yu#*, YinqiuJi#, Brent C. Emerson, Xiaoyang Wang , Chengxi Ye, Chunyan Yang, Zhaoli Ding, Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring, Methods in Ecology and Evolution, 2012, 3, 613-623
